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Award Abstract #0110189
Regulation of Inflorescence Architecture in Maize

| NSF Org: |
IOS
Division of Integrative Organismal Systems
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| Initial Amendment Date: |
September 17, 2001 |
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| Latest Amendment Date: |
July 28, 2005 |
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| Award Number: |
0110189 |
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| Award Instrument: |
Continuing grant |
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| Program Manager: |
Diane Jofuku Okamuro
IOS Division of Integrative Organismal Systems
BIO Directorate for Biological Sciences
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| Start Date: |
October 1, 2001 |
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| Expires: |
September 30, 2007 (Estimated) |
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| Awarded Amount to Date: |
$5697854 |
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| Investigator(s): |
Sarah Hake maizesh@nature.berkeley.edu (Principal Investigator)
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| Sponsor: |
University of California-Berkeley
Sponsored Projects Office
BERKELEY, CA 94704 510/642-8109
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| NSF Program(s): |
PLANT GENOME RESEARCH PROJECT
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| Field Application(s): |
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| Program Reference Code(s): |
BIOT, 9251, 9109, 7218
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| Program Element Code(s): |
1329
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ABSTRACT

The cereal crops, such as maize, rice, wheat, sorghum, barley, millet, and oats, account for the majority of world's nutrition. In addition to the cereal crops, there are approximately 10,000 species of wild grasses, which cover about 1/5 of the earth's land surface. Nearly all grasses are characterized by the spikelet, a short branch that contains floral meristems. Floral meristems produce the seeds that are harvested. The arrangement of these spikelets in different grasses, and the branches on which they are borne, reflects differing fates of the meristems produced during inflorescence development. Identifying the genes that determine meristem fates and understanding the mechanism by which these genes integrate their activities would be of immense value for developmental biology, evolutionary biology, and applied genetics and breeding. Development of maize as a model system assumes that information from maize should be applicable to other cereals, and indeed to any other plant. Comparisons between maize and the other cereals, and between maize and wild grasses, will test this basic assumption of model system development. Inflorescence genes will be identified that will serve as tools for three different disciplines: investigation of meristem development, quantitative trait analysis, and comparative biology in the grasses. Sequencing of expressed genes and expression profiling will be used to identify a subset of genes that are expressed at the earliest stages of development, and that correlate with the proliferation of specific meristem types in selected mutants. The function of these genes will be determined through genetics and mapping. Map positions of the inflorescence genes will provide a link to quantitative traits, and to mutations in maize and other grasses. A selected group of genes will be mutated by reverse genetics to determine their function in inflorescence development. A subset of the genes will also be studied in other cereals and wild grasses. Whether these genes have been modified over evolutionary time and whether they function in other grasses the same way as they do in maize will be determined. These comparisons will provide a valuable data set for the study of evolution and diversity across 60 million years of grass evolution.
PUBLICATIONS PRODUCED AS A RESULT OF THIS RESEARCH

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(Showing: 1 - 10 of 16)
(Showing: 1 - 16 of 16)
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Bommert, P., Lunde, C., Nardmann, J., Vollbrecht, E., Running, M., Jackson, D., Hake, S. and Werr, W.. "thick tassel dwarf1 encodes a putative maize ortholog of the
Arabidopsis CLAVATA1 leucine-rich repeat receptor-like kinase.," Development,, v.132, 2005, p. 1235.
Bommert, P., Satoh-Nagasawa, N., Jackson, D., and Hirano, H.Y.. "Genetics and evolution of grass inflorescence and flower development.," Plant and Cell Physiology, v.46, 2005, p. 69.
Bortiri, E. Chuck, G. Vollbrecht, E., Rocheford, T., Martienssen, R. and Hake, S.. "The ramosa2 LOB gene acts upstream of ra1 to regulate axillary branch
determinacy in maize.," The Plant Cell, v.18, 2006, p. 754.
Bortiri, E., D. Jackson, and S. Hake.. "Advances in Maize Genomics: The Emergence of Positional Cloning.," Curr Opin Plant Biol., v.9, 2006, p. 164.
Chuck G. and Hake, S.. "Regulation of developmental transitions.," Curr Opin Plant Biol., v.8, 2005, p. 67.
Gadberry, M. D., S. T. Malcomber, A. N. Doust, and E. A. Kellogg. (2005). "Primaclade - a flexible tool to find primers across multiple species.," Bioinformatics, v.21, 2005, p. 1263.
Gallavotti A, Zhao Q, Kyozuka J, Meeley RB, Ritter MK, Doebley JF, Pe ME, Schmidt RJ.. "The role of barren stalk1 in the architecture of maize.," Nature, v.432, 2004, p. 630.
Hake, S. and Rocheford, T.. "Exploiting quantitative trait loci in gene discovery.," Genes and Development, v.18, 2004, p. 597.
Laudencia-Chingcuanco, D., and Hake, S.. "The indeterminate floral apex1 gene regulates meristem determinacy and
identity in the maize inflorescence.," Development, v.129, 2002, p. 2629.
Lunde, C. and Hake, S.. "Florets and rosettes: meristem genes in maize and Arabidopsis.," Maydica, v.50, 2005, p. 451.
Malcomber, S. T., and E. A. Kellogg. "Heterogeneous expression patterns of the SEPALLATA-like gene
LEAFY HULL STERILE1 (LHS1) in grasses (Poaceae) suggests separate
roles in meristem determinacy, palea/lemma identity, and flower sexuality.," Plant Cell, v.16, 2004, p. 1692.
Ritter, M.K., Padilla, C.M., and Schmidt, R.J.. "The maize mutant, barren stalk 1, is defective in axillary meristem
development.," Am J Bot, v.89, 2002, p. 203.
Satoh-Nagasawa, N., Nagasawa, N., Malcomber, S., Sakai, H. and Jackson, D.. "A trehalose metabolic enzyme controls inflorescence architecture in maize.
," Nature, v.441, 2006, p. 1211.
Wang, B.-B. & Brendel, V.. "Molecular characterization and phylogeny of U2AF1 homologs in plants.," Plant Physiol., v.140, 2006, p. 624.
Wang, B.-B. & Brendel, V.. "Genome-wide comparative analysis of alternative splicing in plants.," Proc. Natl. Acad. Sci. USA, v.103, 2006, p. 7175.
Whipple CJ, Ciceri P, Padilla CM, Ambrose BA, Bandong SL, Schmidt RJ.. "Conservation of B-class floral homeotic gene function between maize and
Arabidopsis.," Development, v.131, 2004, p. 6083.
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